Publications

Found 14 results
Filters: Keyword is Sequence Analysis, DNA  [Clear All Filters]
2014
Kashtan, N. , Roggensack, S. E. , Rodrigue, S. , Thompson, J. W. , Biller, S. J. , Coe, A. , et al. (2014). Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus. Science, 344(6182), 416-20. presented at the 2014 Apr 25. doi:10.1126/science.1248575
2010
Henn, M. R. , Sullivan, M. B. , Stange-Thomann, N. , Osburne, M. S. , Berlin, A. M. , Kelly, L. , et al. (2010). Analysis of high-throughput sequencing and annotation strategies for phage genomes. PLoS One, 5(2), e9083. presented at the 2010. doi:10.1371/journal.pone.0009083
Sullivan, M. B. , Huang, K. H. , Ignacio-Espinoza, J. C. , Berlin, A. M. , Kelly, L. , Weigele, P. R. , et al. (2010). Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments. Environ Microbiol, 12(11), 3035-56. presented at the 2010 Nov. doi:10.1111/j.1462-2920.2010.02280.x
Rodrigue, S. , Materna, A. C. , Timberlake, S. C. , Blackburn, M. C. , Malmstrom, R. R. , Alm, E. J. , & Chisholm, S. W. . (2010). Unlocking short read sequencing for metagenomics. PLoS One, 5(7), e11840. presented at the 2010. doi:10.1371/journal.pone.0011840
2009
Sullivan, M. B. , Krastins, B. , Hughes, J. L. , Kelly, L. , Chase, M. , Sarracino, D. , & Chisholm, S. W. . (2009). The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial 'mobilome'. Environ Microbiol, 11(11), 2935-51. presented at the 2009 Nov. doi:10.1111/j.1462-2920.2009.02081.x
Martiny, A. C. , Tai, A. P. K. , Veneziano, D. , Primeau, F. , & Chisholm, S. W. . (2009). Taxonomic resolution, ecotypes and the biogeography of Prochlorococcus. Environ Microbiol, 11(4), 823-32. presented at the 2009 Apr. doi:10.1111/j.1462-2920.2008.01803.x
Frias-Lopez, J. , Thompson, A. , Waldbauer, J. , & Chisholm, S. W. . (2009). Use of stable isotope-labelled cells to identify active grazers of picocyanobacteria in ocean surface waters. Environ Microbiol, 11(2), 512-25. presented at the 2009 Feb. doi:10.1111/j.1462-2920.2008.01793.x
Rodrigue, S. , Malmstrom, R. R. , Berlin, A. M. , Birren, B. W. , Henn, M. R. , & Chisholm, S. W. . (2009). Whole genome amplification and de novo assembly of single bacterial cells. PLoS One, 4(9), e6864. presented at the 2009. doi:10.1371/journal.pone.0006864
2008
Frias-Lopez, J. , Shi, Y. , Tyson, G. W. , Coleman, M. L. , Schuster, S. C. , Chisholm, S. W. , & Delong, E. F. . (2008). Microbial community gene expression in ocean surface waters. Proc Natl Acad Sci U S A, 105(10), 3805-10. presented at the 2008 Mar 11. doi:10.1073/pnas.0708897105
Sullivan, M. B. , Coleman, M. L. , Quinlivan, V. , Rosenkrantz, J. E. , DeFrancesco, A. S. , Tan, G. , et al. (2008). Portal protein diversity and phage ecology. Environ Microbiol, 10(10), 2810-23. presented at the 2008 Oct. doi:10.1111/j.1462-2920.2008.01702.x

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