Publications

Found 24 results
Filters: Keyword is Phylogeny  [Clear All Filters]
2023
Berta-Thompson, J. W. , Thomas, E. , Cubillos-Ruiz, A. , Hackl, T. , Becker, J. W. , Coe, A. , et al. (2023). Draft genomes of three closely related low light-adapted Prochlorococcus. BMC Genom Data, 24(1), 11. presented at the 2023 Feb 24. doi:10.1186/s12863-022-01103-4
Hackl, T. , Laurenceau, R. , Ankenbrand, M. J. , Bliem, C. , Cariani, Z. , Thomas, E. , et al. (2023). Novel integrative elements and genomic plasticity in ocean ecosystems. Cell, 186(1), 47-62.e16. presented at the 2023 Jan 05. doi:10.1016/j.cell.2022.12.006
2017
Kashtan, N. , Roggensack, S. E. , Berta-Thompson, J. W. , Grinberg, M. , Stepanauskas, R. , & Chisholm, S. W. . (2017). Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus. ISME J, 11(9), 1997-2011. presented at the 2017 09. doi:10.1038/ismej.2017.64
2014
Kashtan, N. , Roggensack, S. E. , Rodrigue, S. , Thompson, J. W. , Biller, S. J. , Coe, A. , et al. (2014). Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus. Science, 344(6182), 416-20. presented at the 2014 Apr 25. doi:10.1126/science.1248575
2013
Malmstrom, R. R. , Rodrigue, S. , Huang, K. H. , Kelly, L. , Kern, S. E. , Thompson, A. , et al. (2013). Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis. ISME J, 7(1), 184-98. presented at the 2013 Jan. doi:10.1038/ismej.2012.89
Kelly, L. , Ding, H. , Huang, K. H. , Osburne, M. S. , & Chisholm, S. W. . (2013). Genetic diversity in cultured and wild marine cyanomyoviruses reveals phosphorus stress as a strong selective agent. ISME J, 7(9), 1827-41. presented at the 2013 Sep. doi:10.1038/ismej.2013.58
Labrie, S. J. , Frois-Moniz, K. , Osburne, M. S. , Kelly, L. , Roggensack, S. E. , Sullivan, M. B. , et al. (2013). Genomes of marine cyanopodoviruses reveal multiple origins of diversity. Environ Microbiol, 15(5), 1356-76. presented at the 2013 May. doi:10.1111/1462-2920.12053
2011
Sher, D. , Thompson, J. W. , Kashtan, N. , Croal, L. , & Chisholm, S. W. . (2011). Response of Prochlorococcus ecotypes to co-culture with diverse marine bacteria. ISME J, 5(7), 1125-32. presented at the 2011 Jul. doi:10.1038/ismej.2011.1
2010
Coleman, M. L. , & Chisholm, S. W. . (2010). Ecosystem-specific selection pressures revealed through comparative population genomics. Proc Natl Acad Sci U S A, 107(43), 18634-9. presented at the 2010 Oct 26. doi:10.1073/pnas.1009480107
2009
Sullivan, M. B. , Krastins, B. , Hughes, J. L. , Kelly, L. , Chase, M. , Sarracino, D. , & Chisholm, S. W. . (2009). The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial 'mobilome'. Environ Microbiol, 11(11), 2935-51. presented at the 2009 Nov. doi:10.1111/j.1462-2920.2009.02081.x

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