Publications

Found 9 results

Filters: Keyword is Metagenomics [Clear All Filters]

2017

Kashtan, N. , Roggensack, S. E. , Berta-Thompson, J. W. , Grinberg, M. , Stepanauskas, R. , & Chisholm, S. W. . (2017). Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus. ISME J, 11(9), 1997-2011. presented at the 2017 09. doi:10.1038/ismej.2017.64

2014

Kashtan, N. , Roggensack, S. E. , Rodrigue, S. , Thompson, J. W. , Biller, S. J. , Coe, A. , et al. (2014). Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus. Science, 344(6182), 416-20. presented at the 2014 Apr 25. doi:10.1126/science.1248575

2013

Malmstrom, R. R. , Rodrigue, S. , Huang, K. H. , Kelly, L. , Kern, S. E. , Thompson, A. , et al. (2013). Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis. ISME J, 7(1), 184-98. presented at the 2013 Jan. doi:10.1038/ismej.2012.89

Labrie, S. J. , Frois-Moniz, K. , Osburne, M. S. , Kelly, L. , Roggensack, S. E. , Sullivan, M. B. , et al. (2013). Genomes of marine cyanopodoviruses reveal multiple origins of diversity. Environ Microbiol, 15(5), 1356-76. presented at the 2013 May. doi:10.1111/1462-2920.12053

2012

Kelly, L. , Huang, K. H. , Ding, H. , & Chisholm, S. W. . (2012). ProPortal: a resource for integrated systems biology of Prochlorococcus and its phage. Nucleic Acids Res, 40(Database issue), D632-40. presented at the 2012 Jan. doi:10.1093/nar/gkr1022

2010

Coleman, M. L. , & Chisholm, S. W. . (2010). Ecosystem-specific selection pressures revealed through comparative population genomics. Proc Natl Acad Sci U S A, 107(43), 18634-9. presented at the 2010 Oct 26. doi:10.1073/pnas.1009480107

Sullivan, M. B. , Huang, K. H. , Ignacio-Espinoza, J. C. , Berlin, A. M. , Kelly, L. , Weigele, P. R. , et al. (2010). Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments. Environ Microbiol, 12(11), 3035-56. presented at the 2010 Nov. doi:10.1111/j.1462-2920.2010.02280.x

McCarren, J. , Becker, J. W. , Repeta, D. J. , Shi, Y. , Young, C. R. , Malmstrom, R. R. , et al. (2010). Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea. Proc Natl Acad Sci U S A, 107(38), 16420-7. presented at the 2010 Sep 21. doi:10.1073/pnas.1010732107

Rodrigue, S. , Materna, A. C. , Timberlake, S. C. , Blackburn, M. C. , Malmstrom, R. R. , Alm, E. J. , & Chisholm, S. W. . (2010). Unlocking short read sequencing for metagenomics. PLoS One, 5(7), e11840. presented at the 2010. doi:10.1371/journal.pone.0011840